libuproc  1.2.0
Modules
Here is a list of all modules:
[detail level 123]
 Sequence classification
 Protein classification
 
 struct uproc_protresultProtein classification result
 object uproc_protclassProtein sequence classifier
 ORF translation
 
 struct uproc_orfOpen reading frame
 object uproc_orfiterIterates over a DNA/RNA sequence and yield all possible ORFs
 DNA classification
 struct uproc_dnaresultDNA classification result
 object uproc_dnaclassDNA/RNA sequence classifier
 Input/output
 General IO
 
 object uproc_io_streamOptionally compressed I/O stream
 Wrapped standard IO streams
 Wrapped IO streams with gz compression
 Sequence IO
 struct uproc_sequenceDNA/RNA or protein sequence
 object uproc_seqiterFASTA/FASTQ sequence iterator
 Info about compile-time features
 Error handling
 Data structures
 List
 
 object uproc_listList of homogenous items (also known as "vector" or "arraylist")
 Binary search tree
 
 object uproc_bstBinary search tree
 object uproc_bstiterBST in-order iterator
 2D double matrix
 
 object uproc_matrix2D matrix
 Evolutionary Curve
 
 object uproc_ecurveEvolutionary Curve
 Amino acid substitution matrix
 
 object uproc_substmatArray of matrices of amino acid distances
 ID map
 object uproc_idmapMap between protein family name and its numeric identifier
 Grp_datastructs_database
 object uproc_databaseDatabase
 Grp_datastructs_model
 object uproc_modelModel
 Lower-level modules
 Common definitions
 
 Nucleotides and codons
 
 Amino acid translation alphabets
 
 object uproc_alphabetAmino acid alphabet
 Amino acid words
 struct uproc_wordAmino acid word
 object uproc_worditer